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P. Hovland, B. Norris, B. Smith
Making Automatic Differentiation Truly Automatic: Coupling PETSc with ADIC
Conference proceeding, Computational Science -- ICCS 2002, Proceedings of the International Conference on Computational Science, Amsterdam, The Netherlands, April 21--24, 2002. Part II, Springer, 2002
Tools:
ADIC
Theory & Techniques:
Toolkits
Andreas Albrecht, Peter Gottschling, Uwe Naumann
Markowitz-type heuristics for computing Jacobian Matrices efficiently
Conference proceeding, Computational Science -- ICCS 2003, Springer, 2003
Theory & Techniques:
Code Optimization
David M. Gay
Massive Memory Buys Little Speed for Complete, In-Core Sparse Cholesky Factorizations on Some Scalar Computers
Article in Linear Algebra and Its Applications, 1991
not yet classified
Siegfried M. Rump
Mathematically rigorous global optimization in floating-point arithmetic
Article in Special issue of Optimization Methods & Software: Advances in Algorithmic Differentiation, Taylor & Francis, 2018
not yet classified
R. V. Kharche
MATLAB automatic differentiation using source transformation
Ph.D. thesis, Department of Informatics & Systems Engineering, Applied Mathematics & Scientific Computing, Cranfield Defence and Security, Cranfield University, 2011
Tools:
MSAD
M. M. Junge, T. W. N. Haine
Mechanisms of North Atlantic Wintertime Sea Surface Temperature Anomalies
Article in Journal of Climate, 2001
Application Area:
Oceanography
Tools:
TAMC
Theory & Techniques:
Adjoint
Christèle Faure
Memory Limited Adjoint Code Generation
Article in Flow, Turbulence and Combustion, 2001
not yet classified
Masao Iri, Koichi Kubota
Methods of Fast Automatic Differentiation and Applications
Department of Mathematical Engineering and Information Physics, Faculty of Engineering, University of Tokyo, 1987
not yet classified
Qiqi Wang, Parviz Moin, Gianluca Iaccarino
Minimal Repetition Dynamic Checkpointing Algorithm for Unsteady Adjoint Calculation
Article in SIAM Journal on Scientific Computing, SIAM, 2009
Theory & Techniques:
Checkpointing
Christele Faure, Uwe Naumann
Minimizing the Tape Size
Automatic Differentiation of Algorithms: From Simulation to Optimization, Springer, 2002
Tools:
Odyssee
Theory & Techniques:
Data Flow Analysis
B. A. Murtagh, M. A. Saunders
MINOS 5.1 User's Guide
Systems Optimization Laboratory, Stanford University, 1987
not yet classified
Johannes Lotz, Uwe Naumann, Sumit Mitra
Mixed Integer Programming for Call Tree Reversal
Conference proceeding, 2016 Proceedings of the Seventh SIAM Workshop on Combinatorial Scientific Computing, Albuquerque, New Mexico, USA, October 10--12, SIAM, 2016
Theory & Techniques:
Checkpointing
Valérie Pascual, Laurent Hascoët
Mixed-language automatic differentiation
Article in Special issue of Optimization Methods & Software: Advances in Algorithmic Differentiation, Taylor & Francis, 2018
not yet classified
T. Nehrkorn, G. D. Modica, M. Cemiglia, F. H. Ruggiero, J. G. Michalakes, X. Zou
MM5 Adjoint Development using TAMC: Experiences with an Automatic Code Generator
Conference proceeding, Proceedings of 14th Conference on Numerical Weather Prediction, American Meteorological Society, 2001
Application Area:
Meteorology
Tools:
TAMC
F. H. Ruggiero, G. D. Modica, T. Nehrkorn, M. Cemiglia, J. G. Michalakes, X. Zou
MM5-Based 4DVAR: Current Status and Future Plans
Conference proceeding, Proceedings of 12th PSU/NCAR Mesoscale Model Users' Workshop, National Center for Atmospheric Research, 2002
Application Area:
Meteorology
Tools:
TAMC
I. Charpentier, P. Roux
Mode and wavenumber inversion in shallow water using an adjoint method
Article in Journal of Computational Acoustics, 2004
Application Area:
Geophysics
Tools:
Odyssee
Theory & Techniques:
Adjoint
Cheng Qiang, Wang Bin
Model Adjointisation Based on Least Program Behavior Decomposition
Article in Progress in Nature Science, 2002
Tools:
ADG
Cheng Qiang, Zhang Linbo, Wang Bin
Model adjointization and its cost
Article in Science in China, Series F--Information Sciences, 2004
Tools:
ADG
Theory & Techniques:
Adjoint
D. M. Bortz, P. W. Nelson
Model Selection and Mixed-Effects Modeling of HIV Infection Dynamics
Article in Bulletin of Mathematical Biology, 2006
Application Area:
Biomedicine
Tools:
ADiMat, ADOL-C
M. Scholze
Model Studies on the Response of the Terrestrial Carbon Cycle on Climate Change and Variability
Ph.D. thesis, to appear at Max-Planck-Institut für Meteorologie, 2003
Application Area:
Biogeochemistry
Tools:
TAF
Theory & Techniques:
Adjoint, Hessian

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